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Point Spread Function Link to this heading

Effect of All the Wavelets: the PSF Link to this heading

Finally, let’s put them all in:

all-the-wavelets-index-2024-04-16-00-55-04 Effect of all the wavelets - PSF1

This is basically an infinite number of wavelets, and this distribution is now the point spread function.

What we get in the middle is a very elliptical shape, (which should have been a nice symmetrical sphere), and a lot of light is still left around the area of the ideal object. This is actually the limitation of imaging with a light microscope.

Effect of the NA/wavelength on Fringes Link to this heading

  • high NA: small central peak, narrow fringes
  • low NA: large central peak, wide fringes

effect-of-na-on-fringes-index-2024-04-16-00-55-28

  • short wavelength: small PSF

psf-smaller-for-shorter-wavelength-light-index-2024-04-16-00-55-47

PSF Light Distribution Near the Image Plane (XY and XZ) Link to this heading

Looking down on the in-focus plane (XY) Link to this heading

  • PSF has center Airy disk;
  • PSF has a series of concentric rings.
  • Larger rings have progressively lower intensity;
  • The first dark ring radius is $0.61\frac{\lambda}{NA}$.

psf-airy-disk-index-2024-04-16-00-56-08 The Airy Disk and PSF2

psf-xy-index-2024-04-16-00-56-21

On an XZ section Link to this heading

  • More spread along the optical axis (Z axis);
  • First dark island at $2n\frac{\lambda}{NA^2}$; ( $n$ is the refractive index.)
  • Most light within two cones.

psf-xz-index-2024-04-16-00-56-39

Overall distribution Link to this heading

psf-width-height-index-2024-04-16-00-57-00

Width and Depth of PSF3

Effect of NA on PSF Link to this heading

Bigger effect on axial (X-Z) than lateral (X-Y) spread.

na-influences-on-psf-index-2024-04-16-00-57-18

Convolution Link to this heading

The microscope optics convolve each point source in the specimen with the PSF to produce the image.

$$ Specimen \otimes PSF = Image $$

optics-convolve-each-point-source-index-2024-04-16-00-57-39

Objects in a diffraction-limited image of your sample will never appear smaller than the PSF.

For example, that’s say you have two microtubules in your specimen and you have labeled them with GFP, and you imaged them with a 1.4 NA oil objective lens. Microtubules are about 25 nm in diameter, and the PSF for this setup is about 240 nm. So each fluorophore in the microtubule will be convolved with the PSF. You can easily tell by the end of the microtubule that there are two separate microtubules, but not at all by the middle where they are closer than the PSF4.

microtubule-convolve-index-2024-04-16-00-57-56